|
|
Soil biological nitrogen fixation along with hydrological gradient in Chongming Dongtan wetland |
SUN Xiu-ru, TONG Bang-hui, YAN Ru-yu, LIU Min, HAN Mei-li, LIN Xian-biao, CHENG Lü |
Key Laboratory of Geographic Information Science, Ministry of Education, School of Geographic Sciences, East China Normal University, Shanghai 200241, China |
|
|
Abstract In this study, potential rate of nitrogen fixation (BNF), functional gene (nifH) abundance and soil properties were investigated in the rhizosphere soil and bulk soil of Chongming Dongtan wetland in the Yangtze estuary. The rates of soil BNF decreased from high tidal habit to low tidal habit and varied significantly in the water intrusion frequencies (P < 0.05). The rates of BNF were higher in summer than in winter, and higher in rhizosphere soil than bulk soil. The BNF rates ranged from 0.61 to 17.90μmol N/(kg·h) and from 1.41 to 12.10μmol N/(kg·h) in rhizosphere soil and bulk soil in summer, while they were in the range of 0.64~3.54μmol N/(kg·h) and 0.47~2.60μmol N/(kg·h) in winter. The abundances of nifH functional gene ranged from 1.28×107 to 4.61×107copies/g and 2.56×107 to 12.3×108copies/g in rhizosphere soil and bulk soil, respectively. The abundance of nifH gene was significantly related to the rates of BNF (P<0.01). In addition, soil salinity, nitrate, Fe3+ and total phosphorus had great influence on BNF activity. Therefore, these results highlight that water intrusion can alter soil microbial quantity and soil properties, which furthermore affect nitrogen biogeochemical cycling.
|
Received: 20 November 2017
|
|
Corresponding Authors:
刘敏,教授,mliu@geo.ecnu.edu.cn
E-mail: mliu@geo.ecnu.edu.cn
|
|
|
|
[1] |
Deng F, Hou L, Liu M, et al. Dissimilatory nitrate reduction processes and associated contribution to nitrogen removal in sediments of the Yangtze Estuary[J]. Journal of Geophysical Research:Biogeosciences, 2015,120(8):1521-1531.
|
[2] |
Deng H, Wang D, Chen Z, et al. Vertical dissolved inorganic nitrogen fluxes in marsh and mudflat areas of the Yangtze Estuary[J]. Journal of environmental quality, 2014,43(2):745-752.
|
[3] |
Gardner W S, McCarthy M J, An S, et al. Nitrogen fixation and dissimilatory nitrate reduction to ammonium (DNRA) support nitrogen dynamics in Texas estuaries[J]. Limnology and Oceanography, 2006,51(1part2):558-568.
|
[4] |
Camargo J A, Alonso Á. Ecological and toxicological effects of inorganic nitrogen pollution in aquatic ecosystems:a global assessment[J]. Environment international, 2006,32(6):831-849.
|
[5] |
Roberts K L, Kessler A J, Grace M R, et al. Increased rates of dissimilatory nitrate reduction to ammonium (DNRA) under oxic conditions in a periodically hypoxic estuary[J]. Geochimica et Cosmochimica Acta, 2014,133:313-324.
|
[6] |
Souza V F, Santoro A L, van Weerelt M, et al. Sediment denitrification, DNRA and anammox rates in tropical floodplain lake (Pantanal, Brazil)[J]. Oecologia Australis, 2017,16(4):734-744.
|
[7] |
Song G D, Liu S M, Marchant H, et al. Anammox, denitrification and dissimilatory nitrate reduction to ammonium in the East China Sea sediment[J]. Biogeosciences, 2013,10(11):6851-6864.
|
[8] |
Li X, Hou L, Liu M, et al. Primary effects of extracellular enzyme activity and microbial community on carbon and nitrogen mineralization in estuarine and tidal wetlands[J]. Applied microbiology and biotechnology, 2015,99(6):2895-2909.
|
[9] |
管卫兵,王丽娅,许东峰.珠江河口氮和磷循环及溶解氧的数值模拟[J]. Ⅰ 模式建立, 2003,25(1):52-60.
|
[10] |
范改娜,祝贵兵,王雨,等.河流湿地氮循环修复过程中的新型功能微生物[J]. 环境科学学报, 2010,30(8):1558-1563.
|
[11] |
龚骏,张晓黎.微生物在近海氮循环过程的贡献与驱动机制[J]. 微生物学通报, 2013,40(1):44-58.
|
[12] |
胡敏杰,任洪昌,邹芳芳,等.闽江河口淡水,半咸水沼泽土壤碳氮磷分布及计量学特征[J]. 中国环境科学, 2016,36(3):917-926.
|
[13] |
Codispoti L A. An oceanic fixed nitrogen sink exceeding 400Tg N a? 1vs the concept of homeostasis in the fixed-nitrogen inventory[J]. Biogeosciences, 2007,4(2):233-253.
|
[14] |
Breitbarth E, Oschlies A, LaRoche J. Physiological constraints on the global distribution of Trichodesmium? effect of temperature on diazotrophy[J]. Biogeosciences, 2007,4(1):53-61.
|
[15] |
Mulholland M R, Bernhardt P W, Blanco-Garcia J L, et al. Rates of dinitrogen fixation and the abundance of diazotrophs in North American coastal waters between Cape Hatteras and Georges Bank[J]. Limnology and Oceanography, 2012,57(4):1067-1083.
|
[16] |
Bentzon-Tilia M, Traving S J, Mantikci M, et al. Significant N 2fixation by heterotrophs, photoheterotrophs and heterocystous cyanobacteria in two temperate estuaries[J]. The ISME journal, 2015,9(2):273.
|
[17] |
Shiozaki T, Nagata T, Ijichi M, et al. Nitrogen fixation and the diazotroph community in the temperate coastal region of the northwestern North Pacific[J]. Biogeosciences, 2015,12(15):4751-4764.
|
[18] |
Varley J B, Wang Y, Chan K, et al. Mechanistic insights into nitrogen fixation by nitrogenase enzymes[J]. Physical Chemistry Chemical Physics, 2015,17(44):29541-29547.
|
[19] |
Dang H, Yang J, Li J, et al. Environment-dependent distribution of the sediment nifH-harboring microbiota in the northern South China Sea[J]. Applied and environmental microbiology, 2013, 79(1):121-132.
|
[20] |
胡晓婷,程吕,林贤彪,等.沉积物硝酸盐异化还原过程的温度敏感性与影响因素——以长江口青草沙水库为例[J]. 中国环境科学, 2016,36(9):2624-2632.
|
[21] |
Howarth R W, Marino R, Cole J J. Nitrogen fixation in freshwater, estuarine, and marine ecosystems. 2. Biogeochemical controls[J]. Limnology and Oceanography, 1988,33:688-701.
|
[22] |
Huang J, Xu X, Wang M, et al. Responses of soil nitrogen fixation to Spartina alterniflora invasion and nitrogen addition in a Chinese salt marsh[J]. Scientific Reports, 20384:doi:10.1038/srep20384(2016).
|
[23] |
谢文霞,朱鲲杰,崔育倩,等.胶州湾河口湿地土壤有机碳及氮含量空间分布特征研究[J]. 草业学报, 2014,23(6):54-60.
|
[24] |
Moisander P H, Morrison A E, Ward B B, et al. Spatial-temporal variability in diazotroph assemblages in Chesapeake Bay using an oligonucleotide nifH microarray[J]. Environmental microbiology, 2007,9(7):1823-1835.
|
[25] |
Farnelid H, ÖOuml;berg T, Riemann L. Identity and dynamics of putative N2-fixing picoplankton in the Baltic Sea proper suggest complex patterns of regulation[J]. Environmental microbiology reports, 2009,1(2):145-154.
|
[26] |
Langlois R J, Hümmer D, LaRoche J. Abundances and distributions of the dominant nifH phylotypes in the Northern Atlantic Ocean[J]. Applied and environmental microbiology, 2008,74(6):1922-1931.
|
[27] |
Yu Z, Zhou J, Yang J, et al. Vertical distribution of diazotrophic bacterial community associated with temperature and oxygen gradients in a subtropical reservoir[J]. Hydrobiologia, 2014, 741(1):69-77.
|
[28] |
Hou L J, Liu M, Xu S Y, et al. The effects of semi-lunar spring and neap tidal change on nitrification, denitrification and N2O vertical distribution in the intertidal sediments of the Yangtze estuary, China[J]. Estuarine, Coastal and Shelf Science, 2007, 73(3/4):607-616.
|
[29] |
Hou L, Liu M, Carini S A, et al. Transformation and fate of nitrate near the sediment-water interface of Copano Bay[J]. Continental Shelf Research, 2012,35:86-94.
|
[30] |
Meyerson L A. Tidal wetlands primer:An introduction to their ecology, natural history, status, and conservation[J]. Rhodora, 2014,116(968):502-504.
|
[31] |
Hou L, Zheng Y, Liu M, et al. Anaerobic ammonium oxidation (anammox) bacterial diversity, abundance, and activity in marsh sediments of the Yangtze Estuary[J]. Journal of Geophysical Research:Biogeosciences, 2013,118(3):1237-1246.
|
[32] |
Tang Y, Wang L, Jia J, et al. Response of soil microbial community in Jiuduansha wetland to different successional stages and its implications for soil microbial respiration and carbon turnover[J]. Soil Biology and Biochemistry, 2011,43(3):638-646.
|
[33] |
Yu Z, Li Y, Deng H, et al. Effect of Scirpus mariqueter on nitrous oxide emissions from a subtropical monsoon estuarine wetland[J]. Journal of Geophysical Research:Biogeosciences, 2012,117(G2).
|
[34] |
Zheng Y, Hou L, Liu M, et al. Diversity, abundance, and activity of ammonia-oxidizing bacteria and archaea in Chongming eastern intertidal sediments[J]. Applied microbiology and biotechnology, 2013,97(18):8351-8363.
|
[35] |
Andersson B, Sundbäck K, Hellman M, et al. Nitrogen fixation in shallow-water sediments:Spatial distribution and controlling factors[J]. Limnology and Oceanography, 2014,59(6):1932-1944.
|
[36] |
Bertics V J, Löscher C R, Salonen I, et al. Occurrence of benthic microbial nitrogen fixation coupled to sulfate reduction in the seasonally hypoxic Eckernförde Bay, Baltic Sea[J]. Biogeosciences, 2013,10(3):1243-1258.
|
[37] |
Parkinson J A, Allen S E. A wet oxidation procedure suitable for the determination of nitrogen and mineral nutrients in biological material[J]. Communications in Soil Science & Plant Analysis, 1975,6(1):1-11.
|
[38] |
Zheng Y, Hou L, Newell S, et al. Community dynamics and activity of ammonia-oxidizing prokaryotes in intertidal sediments of the Yangtze Estuary[J]. Applied and Environmental Microbiology, 2014,80(1):408-419.
|
[39] |
Lovley D R, Phillips E J P. 1987. Rapid assay for microbially reducible ferric iron in aquatic sediments[J]. Appl. Environ. Microbiol., 53,1536-1540.
|
[40] |
Capone D G. Determination of nitrogenase activity in aquatic samples using the acetylene reduction procedure[J]. Handbook of methods in aquatic microbial ecology, 1993:621-631.
|
[41] |
Hardy R W F, Burns R C, Holsten R D. Applications of the acetylene-ethylene assay for measurement of nitrogen fixation[J]. Soil Biology and Biochemistry, 1973,5(1):47-81.
|
[42] |
Montoya J P, Voss M, Kahler P, et al. A simple, high-precision, high-sensitivity tracer assay for N (inf2) fixation[J]. Applied and Environmental Microbiology, 1996,62(3):986-993.
|
[43] |
Stewart W D, Fitzgerald G P, Burris R H. In situ studies on N2fixation using the acetylene reduction technique[J]. Proceedings of the National Academy of Sciences, 1967,58(5):2071-2078.
|
[44] |
Zhang R, Chen M, Yang Q, et al. Physical-biological coupling of N2fixation in the northwestern South China Sea coastal upwelling during summer[J]. Limnology and Oceanography, 2015,60(4):1411-1425.
|
[45] |
Lin X, Li X, Gao D, et al. Ammonium production and removal in the sediments of Shanghai river networks:Spatiotemporal variations, controlling factors and environmental implications[J]. Journal of Geophysical Research:Biogeosciences.
|
[46] |
徐治国,何岩,闫百兴,等.营养物及水位变化对湿地植物的影响[J]. 生态学杂志, 2006,25(1):87-92.
|
[47] |
高灯州,曾从盛,章文龙,等.闽江口湿地土壤有机碳及其活性组分沿水文梯度分布特征[J]. 水土保持学报, 2014,28(6):216-221.
|
[48] |
Karl D, Michaels A, Bergman B, et al. Dinitrogen fixation in the world's oceans[M]//The Nitrogen Cycle at Regional to Global Scales. Springer Netherlands, 2002:47-98.
|
[49] |
Kitajima S, Furuya K, Hashihama F, et al. Latitudinal distribution of diazotrophs and their nitrogen fixation in the tropical and subtropical western North Pacific[J]. Limnology and Oceanography, 2009,54(2):537.
|
[50] |
Hashihama F, Furuya K, Kitajima S, et al. Macro-scale exhaustion of surface phosphate by dinitrogen fixation in the western North Pacific[J]. Geophysical Research Letters, 2009, 36(3):L03610.
|
[51] |
Shiozaki T, Furuya K, Kodama T, et al. Contribution of N2fixation to new production in the western North Pacific Ocean along 155E[J]. Marine Ecology Progress Series, 2009,377:19-32.
|
[52] |
高灯州,章文龙,曾从.闽江河口湿地土壤生物和非生物因子与水淹频率的关系[J]. 湿地科学, 2016,14(1):27-36.
|
[53] |
万忠梅,宋长春,郭跃东,等.毛苔草湿地土壤酶活性及活性有机碳组分对水分梯度的响应[J]. 生态学报, 2008,28(12):5980-5986.
|
[54] |
Poret-Peterson A T, Ji B, Engelhaupt E, et al. Soil microbial biomass along a hydrologic gradient in a subsiding coastal bottomland forest:Implications for future subsidence and sea-level rise[J]. Soil Biology and Biochemistry, 2007,39(2):641-645.
|
[55] |
Crooks J A. Characterizing ecosystem-level consequences of biological invasions:the role of ecosystem engineers[J]. Oikos, 2002,97(2):153-166.
|
[56] |
Didham R K, Tylianakis J M, Hutchison M A, et al. Are invasive species the drivers of ecological change?[J]. Trends in Ecology & Evolution, 2005,20(9):470-474.
|
[57] |
Ehrenfeld J G. Effects of exotic plant invasions on soil nutrient cycling processes[J]. Ecosystems, 2003,6(6):503-523.
|
[58] |
Tye D R C, Drake D C. An exotic Australian Acacia fixes more N than a coexisting indigenous Acacia in a South African riparian zone[J]. Plant ecology, 2012,213(2):251-257.
|
[59] |
Vitousek P M, Walker L R. Biological invasion by Myrica faya in Hawai'i:plant demography, nitrogen fixation, ecosystem effects[J]. Ecological monographs, 1989,59(3):247-265.
|
[60] |
牛佳,周小奇,蒋娜,等.若尔盖高寒湿地干湿土壤条件下微生物群落结构特征[J]. 生态学报, 2011,31(2):474-482.
|
[61] |
Bu N, Qu J, Li Z, et al. Effects of Spartina alterniflora invasion on soil respiration in the Yangtze River Estuary, China[J]. PloS one, 2015,10(3):e0121571.
|
[62] |
Chen X, Zong Y. Coastal erosion along the Changjiang deltaic shoreline, China:history and prospective[J]. Estuarine, Coastal and Shelf Science, 1998,46(5):733-742.
|
[63] |
Welsh J, McClelland M. Fingerprinting genomes using PCR with arbitrary primers[J]. Nucleic acids research, 1990,18(24):7213-7218.
|
[64] |
黄敏,吴金水,黄巧云,等.土壤磷素微生物作用的研究进展[J]. 生态环境, 2003,12(3):366-370.
|
[65] |
罗先香,敦萌,闫琴.黄河口湿地土壤磷素动态分布特征及影响因素[J]. 水土保持学报, 2011,25(5):154-160.
|
[66] |
Hamer U, Makeschin F, Stadler J, et al. Soil organic matter and microbial community structure in set-aside and intensively managed arable soils in NE-Saxony, Germany[J]. Applied Soil Ecology, 2008,40(3):465-475.
|
[67] |
Yao H, He Z L, Wilson M J, et al. Microbial biomass and community structure in a sequence of soils with increasing fertility and changing land use[J]. Microbial Ecology, 2000, 40(3):223-237.
|
[68] |
Syvitski J P M, Kettner A J, Overeem I, et al. Sinking Deltas Due to Human Activities. Nature Geoscience, 2,681-686[J]. 2009.
|
[69] |
FitzGerald D M, Fenster M S, Argow B A, et al. Coastal impacts due to sea-level rise[J]. Annu. Rev. Earth Planet. Sci., 2008,36:601-647.
|
[70] |
Liu J P, Xu K H, Li A C, et al. 2007. Flux and fate of Yangtze River sediment delivered to the East China Sea[J]. Geomorphology, 85(3/4):208-224.
|
[71] |
Wang R Z, Yuan L, Zhang L Q. Impacts of Spartina alterniflora invasion on the benthic communities of salt marshes in the Yangtze Estuary, China[J]. Ecological Engineering, 2010,36:799-806.
|
[72] |
Hanson R B, Gundersen K. Relationship between nitrogen fixation (acetylene reduction) and the C:N ratio in a polluted coral reef ecosystem, Kaneohe Bay, Hawaii[J]. Estuarine and coastal marine science, 1977,5(3):437-444.
|
[73] |
林峰.中国边缘海生物固氮速率的时空分布及其影响因素[D]. 2014.
|
[74] |
Zhang R, Chen M, Yang Q, et al. Physical-biological coupling of N2fixation in the northwestern South China Sea coastal upwelling during summer[J]. Limnology and Oceanography, 2015,60(4):1411-1425.
|
|
|
|