Bacterial communities in Nanchang section of the Ganjiang River in wet seaon
WANG Peng1,2, CHEN bo1,2, LI Chuang-qiong1,2, LI Yan1,2
1. Key Laboratory of Poyang Lake Wetland and Watershed Research, Ministry of Education, Jiangxi Normal University, Nanchang 330022, China;
2. School of Geography and Environment, Jiangxi Normal University, Nanchang 330022, China
Bacteria are key players in the ecosystem of rivers. In this study, bacterial communities in Nanchang section of the Ganjiang River in wet season (April to Auguest) were analyzed. The results showed that the dominant phyla were Actinobacteria (41.18%) and Proteobacteria (31.79%), followed by Firmicutes (10.04%), Bacteroidetes (7.26%) and Cyanobacteria (4.01%). The dominant genus was hgcI_clade (16.39%). There were no significant differences of the bacterial community abundance and diversity in river water between the upstream, the downtown and the downstream of urban area, while there were significant differences between months. Except for Proteobacteria and Verrucomicrobia, there was significant difference of the bacterial phyla abundance between months. Proteobacteria (mainly Betaproteobacteria) was the only phylum whose abundance showed significant difference between sampling sites. Temperature and streamflow were the main environmental factors influencing bacterial communities in river water, while temperature was more correlated with the bacterial Operational Taxonomic Unit (OTU), and streamflow was more correlated with bacterial phyla communities. Firmicutes became the dominant phylum instead of Actinobacteria and Proteobacteria in a stormflow. The optimal subset of environmental variables with the best correlation to OTU abundance included temperature, flow rate and EC, and with the best correlation to phylum abundance included temperature and flow rate. The influence of water chemical parameters on bacterial communities was less than that of hydrometeorological factors including temperature and streamflow.
王鹏, 陈波, 李传琼, 李燕. 赣江南昌段丰水期细菌群落特征[J]. 中国环境科学, 2016, 36(8): 2453-2462.
WANG Peng, CHEN bo, LI Chuang-qiong, LI Yan. Bacterial communities in Nanchang section of the Ganjiang River in wet seaon. CHINA ENVIRONMENTAL SCIENCECE, 2016, 36(8): 2453-2462.
Cole J J, Prairie Y T, Caraco N F, et al. Plumbing the global carbon cycle: Integrating inland waters into the terrestrial carbon budget[J]. Ecosystems, 2007,10(1):172-185.
[2]
Findlay S. Stream microbial ecology[J]. Journal of the North American Benthological Society, 2010,29(1):170-181.
Caporaso J G, Lauber C L, Walters W A, et al. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample[J]. Proceedings of the National Academy of Sciences of the United States of America, 2011,108(Supplement 1):4516-4522.
[5]
Staley C, Johnson D, Gould T J, et al. Frequencies of heavy metal resistance are associated with land cover type in the Upper Mississippi River[J]. Science of The Total Environment, 2015, 511:461-468.
Dennis K L, Wang Y, Blatner N R, et al. Adenomatous polyps are driven by microbe-instigated focal inflammation and are controlled by IL-10-producing T cells[J]. Cancer Research, 2013,73(19):5905-5913.
[20]
Madsen E L. Microorganisms and their roles in fundamental biogeochemical cycles[J]. Current Opinion in Biotechnology, 2011,22(3):456-464.
[21]
Savio D, Sinclair L, Ijaz U Z, et al. Bacterial diversity along a 2600km river continuum[J]. Environmental Microbiology, 2015, 17(12):4994-5007.
[22]
Kolmakova O V, Gladyshev M I, Rozanov A S, et al. Spatial biodiversity of bacteria along the largest Arctic river determined by next-generation sequencing[J]. FEMS Microbiology Ecology, 2014,89(2):442-450.
[23]
Jeon E M, Kim H J, Jung K, et al. Impact of Asian dust events on airborne bacterial community assessed by molecular analyses[J]. Atmospheric Environment, 2011,45(25):4313-4321.
[24]
Xia N, Xia X, Liu T, et al. Characteristics of bacterial community in the water and surface sediment of the Yellow River, China, the largest turbid river in the world[J]. Journal of Soils and Sediments, 2014,14(11):1894-1904.
Liu Z, Huang S, Sun G, et al. Phylogenetic diversity, composition and distribution of bacterioplankton community in the Dongjiang River, China[J]. FEMS Microbiology Ecology, 2012,80(1):30-44.
[27]
Bai Y, Qi W, Liang J, et al. Using high-throughput sequencing to assess the impacts of treated and untreated wastewater discharge on prokaryotic communities in an urban river[J]. Applied Microbiology and Biotechnology, 2014,98(4):1841-1851.
Staley C, Gould T J, Wang P, et al. Species sorting and seasonal dynamics primarily shape bacterial communities in the Upper Mississippi River[J]. Science of the Total Environment, 2015, 505:435-445.
[30]
Vannote R L, Minshall G W, Cummins K W, et al. The river continuum concept[J]. Canadian Journal of Fisheries and Aquatic Sciences, 1980,37(1):130-137.
[31]
Jeong J, Park H, Lee K, et al. Microbial community analysis and identification of alternative host-specific fecal indicators in fecal and river water samples using pyrosequencing[J]. The Journal of Microbiology, 2011,49(4):585-594.
[32]
Bäckhed F, Ley R E, Sonnenburg J L, et al. Host-bacterial mutualism in the human intestine[J]. Science, 2005,307(5717): 1915-1920.
[33]
Shanks O C, Newton R J, Kelty C A, et al. Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales[J]. Applied and Environmental Microbiology, 2013,79(9):2906-2913.
[34]
Newton R J, Bootsma M J, Morrison H G, et al. A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of lake Michigan[J]. Microbial Ecology, 2013, 65(4):1011-1023.
[35]
Madigan M T, Martinko J M, Parker J, et al. Biology of microorganisms[M]. Upper Saddle River, NJ: Prentice Hall, 1997.
[36]
Ricciardi F, Bonnineau C, Faggiano L, et al. Is chemical contamination linked to the diversity of biological communities in rivers?[J]. TrAC Trends in Analytical Chemistry, 2009,28(5): 592-602.
[37]
Sieburth J M. Seasonal selection of estuarine bacteria by water temperature[J]. Journal of Experimental Marine Biology and Ecology, 1967,1(1):98-121.
[38]
Mccaulou D R, Bales R C, Arnold R G. Effect of temperature-controlled motility on transport of bacteria and microspheres through saturated sediment[J]. Water Resources Research, 1995, 31(2):271-280.